SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113000231
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr20:32741561-32777691
Size: 36130
Super-enhancer rank 231
Number of SE elements: 12
ChIP density(Case|Control): 45610.512|5184.655
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNMT3B ;
ROSE Overlap COMMD7 ; DNMT3B ;
ROSE Proximal DNMT3B ; MAPRE1 ; COMMD7 ;
ROSE Closest DNMT3B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DNMT3B ; MAPRE1 ; COMMD7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000231 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers