SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113000208
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr1:36371598-36412662
Size: 41064
Super-enhancer rank 208
Number of SE elements: 4
ChIP density(Case|Control): 49621.7376|6718.0704
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LSM10 ;
ROSE Overlap STK40 ; LSM10 ;
ROSE Proximal EVA1B ; OSCP1 ;
ROSE Closest LSM10 ;
Lasso ;
PreSTIGE ;
ABC AGO3 ;
BETA OSCP1 ; EVA1B ; STK40 ; SH3D21 ; CSF3R ; LSM10 ; MRPS15 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000208 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers