SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113000172
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr16:11197727-11257157
Size: 59430
Super-enhancer rank 172
Number of SE elements: 17
ChIP density(Case|Control): 53730.663|7470.351
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SOCS1 ;
ROSE Overlap SOCS1 ;
ROSE Proximal PRM2 ; TNP2 ; PRM1 ; PRM3 ; MIR548H2 ;
ROSE Closest SOCS1 ;
Lasso ;
PreSTIGE ;
ABC SOCS1 ;
BETA PRM2 ; PRM3 ; PRM1 ; TNP2 ; MIR548H2 ; SOCS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000172 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers