SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113000077
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr1:248856846-248914642
Size: 57796
Super-enhancer rank 77
Number of SE elements: 19
ChIP density(Case|Control): 71846.2076|10102.7408
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PGBD2 ;
ROSE Overlap ZNF692 ; PGBD2 ;
ROSE Proximal ZNF672 ; SH3BP5L ; MIR3124 ; ZNF692 ;
ROSE Closest PGBD2 ;
Lasso ZNF672 ; ZNF692 ; SH3BP5L ; PGBD2 ;
PreSTIGE ;
ABC ;
BETA ZNF692 ; PGBD2 ; ZNF672 ; MIR3124 ; SH3BP5L ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000077 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers