SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_111600548
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_native
Genomic region: chr17:63839440-63853007
Size: 13567
Super-enhancer rank 548
Number of SE elements: 4
ChIP density(Case|Control): 44285.4014|2191.0705
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMARCD2 ;
ROSE Overlap SMARCD2 ;
ROSE Proximal CSH2 ; PSMC5 ; CSH1 ; GH2 ; TCAM1P ; FTSJ3 ;
ROSE Closest SMARCD2 ;
Lasso FTSJ3 ; TACO1 ; DDX42 ; CEP95 ;
PreSTIGE ;
ABC ;
BETA CD79B ; GH1 ; CSHL1 ; CSH1 ; DDX42 ; GH2 ; PSMC5 ; CSH2 ; TCAM1P ; CCDC47 ; FTSJ3 ; SMARCD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_111600548 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers