SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_111600347
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_native
Genomic region: chr1:27800-39681
Size: 11881
Super-enhancer rank 347
Number of SE elements: 1
ChIP density(Case|Control): 54435.1777|1948.484
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM138A ;
ROSE Overlap FAM138C ; MIR1302-10 ; WASH7P ;
ROSE Proximal DDX11L1 ; OR4F5 ; FAM138A ; MIR6859-1 ; MIR1302-11 ;
ROSE Closest FAM138C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6859-1 ; MIR6859-3 ; OR4F5 ; FAM138F ; MIR1302-2 ; MIR1302-9 ; MIR1302-10 ; WASH7P ; MIR6859-4 ; MIR6859-2 ; MIR1302-11 ; FAM138A ; DDX11L1 ; FAM138C ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_111600347 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers