SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_109900673
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_DMSO_noIFNG
Genomic region: chr3:177333820-177362203
Size: 28383
Super-enhancer rank 673
Number of SE elements: 19
ChIP density(Case|Control): 28153.0977|4944.3186
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00501 ;
ROSE Overlap ;
ROSE Proximal LINC00501 ;
ROSE Closest LINC00501 ;
Lasso TBL1XR1 ;
PreSTIGE ;
ABC ;
BETA LINC00501 ; LINC00578 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109900673 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers