SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109900236
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_DMSO_noIFNG
Genomic region: chr1:156146244-156199232
Size: 52988
Super-enhancer rank 236
Number of SE elements: 23
ChIP density(Case|Control): 51610.312|10189.5924
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEMA4A ;
ROSE Overlap SEMA4A ; SLC25A44 ;
ROSE Proximal SLC25A44 ; LMNA ; PAQR6 ; BGLAP ; SEMA4A ; PMF1 ;
ROSE Closest SEMA4A ;
Lasso PMF1 ; SLC25A44 ; SEMA4A ;
PreSTIGE ;
ABC SLC25A44 ; PMF1 ; PMF1-BGLAP ;
BETA PAQR6 ; PMF1-BGLAP ; SLC25A44 ; LMNA ; PMF1 ; SEMA4A ; BGLAP ; MEX3A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109900236 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers