SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109100449
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr1:155043843-155054284
Size: 10441
Super-enhancer rank 449
Number of SE elements: 4
ChIP density(Case|Control): 13480.3751|1247.6995
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100505666 ;
ROSE Overlap ADAM15 ; DCST1 ; LOC100505666 ;
ROSE Proximal ZBTB7B ; DCST2 ; ADAM15 ; EFNA4 ; EFNA3 ; DCST1 ;
ROSE Closest LOC100505666 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ADAM15 ; FLAD1 ; SHC1 ; EFNA1 ; SLC50A1 ; DCST1 ; LOC100505666 ; DCST2 ; CKS1B ; DPM3 ; PYGO2 ; ZBTB7B ; MIR4258 ; EFNA4 ; LENEP ; PBXIP1 ; EFNA3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100449 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers