SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_109100439
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr11:64863991-64888013
Size: 24022
Super-enhancer rank 439
Number of SE elements: 4
ChIP density(Case|Control): 15299.6118|2964.3148
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EHD1 ;
ROSE Overlap EHD1 ;
ROSE Proximal GPHA2 ; ATG2A ; MIR192 ; MIR6750 ; MIR6749 ; CDC42BPG ; PPP2R5B ; MIR194-2 ;
ROSE Closest EHD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CDC42BPG ; MAP4K2 ; MIR192 ; MEN1 ; SF1 ; EHD1 ; C11orf85 ; MIR6749 ; PPP2R5B ; MIR194-2 ; GPHA2 ; MIR6750 ; ATG2A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100439 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers