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Super-enhancer search result
Super-enhancer detail
Super-enhancer overview
SE ID:
SE_02_109100425
Species:
Human
Data source:
NCBI GEO/SRA
Biosample type:
Cell line
Tissue type:
Mammary gland
Biosample name:
T47D_shCtrl_shRING1B_8hr
Genomic region:
chr8:143735811-143741163
Size:
5352
Super-enhancer rank
:
425
Number of SE elements:
3
ChIP density(Case|Control):
12989.8392|414.2448
Genome browser:
Super-enhancer associated network
Super-enhancer annotation
Common SNP
eQTL
Risk SNP
TFBS conserved
CRISPR/Cas9 target site
DHS
Enhancer
Methylation-450K
TAD
Chromatin accessibility region
Methylation-WGBS
Chromatin interaction
1~5
5~10
10~MAX
Super-enhancer associated genes
Strategies/Algorithm
Gene name
The closest active:
FAM83H-AS1
;
ROSE Overlap
FAM83H-AS1
;
ROSE Proximal
MAPK15
;
FAM83H
;
MIR4664
;
BREA2
;
CCDC166
;
ROSE Closest
FAM83H-AS1
;
Lasso
;
PreSTIGE
;
Network diagram of super-enhancer and associated genes
Expression of
SE_02_109100425
associated genes
Cell line (ENCODE)
Primary cell (ENCODE)
Normal tissue (GTEx)
Cell line (CCLE)
Cancer (TCGA)
TF Binding to Super-enhancer
TF Predicted by Motif
TF Identified by ChIP-seq
Super-enhancer element (H3K27ac)
1~5
5~10
10~MAX
GREAT
Download bed
Overlap with other super-enhancers