SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109100397
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr11:83157114-83161381
Size: 4267
Super-enhancer rank 397
Number of SE elements: 1
ChIP density(Case|Control): 13698.7768|586.7125
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCF11 ;
ROSE Overlap PCF11 ;
ROSE Proximal ANKRD42 ;
ROSE Closest PCF11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PCF11 ; ANKRD42 ; RAB30 ; RAB30-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100397 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers