SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_109100380
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr9:136992402-136997891
Size: 5489
Super-enhancer rank 380
Number of SE elements: 1
ChIP density(Case|Control): 14201.6897|653.191
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLIC3;
ROSE Overlap C9orf142; CLIC3;
ROSE Proximal LCNL1; ABCA2; FBXW5; C9orf139; FUT7; NPDC1; LCN12; C8G; PTGDS;
ROSE Closest CLIC3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100380 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers