SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_109100193
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr3:42472216-42492172
Size: 19956
Super-enhancer rank 193
Number of SE elements: 5
ChIP density(Case|Control): 22729.884|2765.9016
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VIPR1;
ROSE Overlap VIPR1;
ROSE Proximal VIPR1-AS1; VIPR1;
ROSE Closest VIPR1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100193 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers