SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109100143
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr20:33717009-33735151
Size: 18142
Super-enhancer rank 143
Number of SE elements: 4
ChIP density(Case|Control): 26474.6206|2287.7062
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF341 ;
ROSE Overlap PXMP4 ; ZNF341 ;
ROSE Proximal E2F1 ; NECAB3 ; ZNF341 ;
ROSE Closest ZNF341 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZNF341-AS1 ; NECAB3 ; E2F1 ; ZNF341 ; ACTL10 ; PXMP4 ; C20orf144 ; CHMP4B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100143 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers