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Super-enhancer overview

SE ID: SE_02_109100098
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr19:39122509-39168291
Size: 45782
Super-enhancer rank 98
Number of SE elements: 20
ChIP density(Case|Control): 33251.4666|3090.285
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PAK4;
ROSE Overlap PAK4;
ROSE Proximal PAPL; SYCN; PAK4; NCCRP1;
ROSE Closest PAK4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100098 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers