SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109100085
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr17:41764885-41801674
Size: 36789
Super-enhancer rank 85
Number of SE elements: 15
ChIP density(Case|Control): 36284.9907|4190.2671
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: JUP ;
ROSE Overlap JUP ;
ROSE Proximal FKBP10 ; HAP1 ; P3H4 ; JUP ; NT5C3B ; KLHL10 ;
ROSE Closest JUP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HAP1 ; JUP ; NT5C3B ; GAST ; EIF1 ; FKBP10 ; P3H4 ; KLHL10 ; KLHL11 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100085 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers