SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109100081
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr19:57797775-57821212
Size: 23437
Super-enhancer rank 81
Number of SE elements: 13
ChIP density(Case|Control): 33964.9004|1692.1514
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF552 ;
ROSE Overlap ZNF552 ;
ROSE Proximal ZNF587 ; ZNF587B ; FKBP1AP1 ; ZNF586 ;
ROSE Closest ZNF552 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZNF587 ; ZNF671 ; ZNF586 ; ZNF814 ; FKBP1AP1 ; ZNF552 ; ZNF776 ; ZNF587B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100081 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers