SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_109100055
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr20:346620-384137
Size: 37517
Super-enhancer rank 55
Number of SE elements: 9
ChIP density(Case|Control): 42214.1284|3811.7272
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRIB3 ;
ROSE Overlap TRIB3 ; NRSN2 ;
ROSE Proximal RBCK1 ; SOX12 ; NRSN2-AS1 ; ZCCHC3 ;
ROSE Closest TRIB3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C20orf96 ; TRIB3 ; SOX12 ; NRSN2-AS1 ; RBCK1 ; ZCCHC3 ; TBC1D20 ; NRSN2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100055 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers