SE
db
2.0
Home
Data-Browse
Search
Analysis
GENE-SE Analysis
SNP-SE Analysis
Overlap Analysis
Differential-overlapping-SE Analysis
SE-based TF-Gene Analysis
Genome-Browser
Download
Statistics
Contact
Help
Search
Super-enhancer search result
Super-enhancer detail
Super-enhancer overview
SE ID:
SE_02_109100054
Species:
Human
Data source:
NCBI GEO/SRA
Biosample type:
Cell line
Tissue type:
Mammary gland
Biosample name:
T47D_shCtrl_shRING1B_8hr
Genomic region:
chr1:150559433-150579710
Size:
20277
Super-enhancer rank
:
54
Number of SE elements:
7
ChIP density(Case|Control):
41685.4566|3057.7716
Genome browser:
Super-enhancer associated network
Super-enhancer annotation
Common SNP
eQTL
Risk SNP
TFBS conserved
CRISPR/Cas9 target site
DHS
Enhancer
Methylation-450K
TAD
Chromatin accessibility region
Methylation-WGBS
Chromatin interaction
1~5
5~10
10~MAX
Super-enhancer associated genes
Strategies/Algorithm
Gene name
The closest active:
ADAMTSL4-AS1
;
ROSE Overlap
ADAMTSL4
;
MCL1
;
ADAMTSL4-AS1
;
ROSE Proximal
ADAMTSL4
;
ENSA
;
MCL1
;
FALEC
;
MIR4257
;
ROSE Closest
ADAMTSL4-AS1
;
Lasso
;
PreSTIGE
;
Network diagram of super-enhancer and associated genes
Expression of
SE_02_109100054
associated genes
Cell line (ENCODE)
Primary cell (ENCODE)
Normal tissue (GTEx)
Cell line (CCLE)
Cancer (TCGA)
TF Binding to Super-enhancer
TF Predicted by Motif
TF Identified by ChIP-seq
Super-enhancer element (H3K27ac)
1~5
5~10
10~MAX
GREAT
Download bed
Overlap with other super-enhancers