SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_109000526
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_8hr
Genomic region: chr9:136788800-136803109
Size: 14309
Super-enhancer rank 526
Number of SE elements: 5
ChIP density(Case|Control): 16825.9531|1794.3486
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC183;
ROSE Overlap TMEM141; CCDC183;
ROSE Proximal LOC100128593; LCN6; RABL6; C9orf172; LCN15; LCN8; MIR6722; PHPT1; MIR4292; MAMDC4; LCN10; CCDC183-AS1;
ROSE Closest CCDC183;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109000526 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers