SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_109000319
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_8hr
Genomic region: chr16:88905340-88929990
Size: 24650
Super-enhancer rank 319
Number of SE elements: 10
ChIP density(Case|Control): 23158.675|2962.93
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100129697;
ROSE Overlap CBFA2T3;
ROSE Proximal PABPN1L; GALNS; LOC100129697; TRAPPC2L;
ROSE Closest LOC100129697;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109000319 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers