SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_108800605
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr13:54181515-54188313
Size: 6798
Super-enhancer rank 605
Number of SE elements: 1
ChIP density(Case|Control): 25843.2768|512.5692
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00558 ;
ROSE Overlap ;
ROSE Proximal LINC00458 ;
ROSE Closest LINC00458 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00458 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800605 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers