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Super-enhancer overview

SE ID: SE_02_108800400
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr16:587153-595370
Size: 8217
Super-enhancer rank 400
Number of SE elements: 4
ChIP density(Case|Control): 34234.4871|750.2121
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RAB40C;
ROSE Overlap RAB40C;
ROSE Proximal NHLRC4; WFIKKN1; C16orf13; PRR35; FAM195A; PIGQ; RAB40C; MIR3176;
ROSE Closest RAB40C;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800400 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers