SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_108800295
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr1:17402468-17444019
Size: 41551
Super-enhancer rank 295
Number of SE elements: 11
ChIP density(Case|Control): 43009.4401|2734.0558
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RCC2 ;
ROSE Overlap RCC2 ;
ROSE Proximal PADI6 ;
ROSE Closest RCC2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RCC2 ; PADI6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800295 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers