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Super-enhancer overview

SE ID: SE_02_108800229
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr9:136480502-136485944
Size: 5442
Super-enhancer rank 229
Number of SE elements: 3
ChIP density(Case|Control): 47063.5044|779.2944
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEC16A ;
ROSE Overlap C9orf163 ; SEC16A ;
ROSE Proximal INPP5E ; MIR4673 ;
ROSE Closest SEC16A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SDCCAG3 ; PMPCA ; SNAPC4 ; SEC16A ; NOTCH1 ; MIR4674 ; LINC01573 ; INPP5E ; MIR4673 ; C9orf163 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800229 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers