SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_108800170
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr1:156689318-156713236
Size: 23918
Super-enhancer rank 170
Number of SE elements: 11
ChIP density(Case|Control): 57967.6648|3008.8844
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CRABP2 ;
ROSE Overlap CRABP2 ;
ROSE Proximal HDGF ; BCAN ; NES ; RRNAD1 ; ISG20L2 ; MRPL24 ;
ROSE Closest CRABP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RRNAD1 ; GPATCH4 ; MRPL24 ; HDGF ; BCAN ; CRABP2 ; ISG20L2 ; HAPLN2 ; NES ; PRCC ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800170 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers