SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_108800038
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr21:46281641-46303229
Size: 21588
Super-enhancer rank 38
Number of SE elements: 11
ChIP density(Case|Control): 117395.544|2294.8044
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: YBEY ;
ROSE Overlap C21orf58 ; MCM3AP ; YBEY ;
ROSE Proximal PCNT ;
ROSE Closest YBEY ;
Lasso ;
PreSTIGE ;
ABC ;
BETA YBEY ; PCNT ; MCM3AP-AS1 ; C21orf58 ; LSS ; MCM3AP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800038 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers