SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_108800009
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr2:11477781-11588351
Size: 110570
Super-enhancer rank 9
Number of SE elements: 31
ChIP density(Case|Control): 204731.412|7198.107
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GREB1 ;
ROSE Overlap MIR4429 ; GREB1 ;
ROSE Proximal E2F6 ;
ROSE Closest GREB1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA E2F6 ; GREB1 ; MIR4429 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800009 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers