SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_108200328
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Retina
Biosample name: retina
Genomic region: chr3:48683283-48717994
Size: 34711
Super-enhancer rank 328
Number of SE elements: 7
ChIP density(Case|Control): 25779.8597|4561.0254
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NCKIPSD;
ROSE Overlap IP6K2; NCKIPSD;
ROSE Proximal MIR6824; CELSR3; SLC26A6; CELSR3-AS1; MIR4793; IP6K2;
ROSE Closest NCKIPSD;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108200328 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers