SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_107900144
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Muscle
Biosample name: RMS246_PAX3-NCOA1
Genomic region: chr9:133509388-133540820
Size: 31432
Super-enhancer rank 144
Number of SE elements: 5
ChIP density(Case|Control): 52535.4448|10529.72
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM8C;
ROSE Overlap ADAMTSL2; TMEM8C;
ROSE Proximal FAM163B; CACFD1; SLC2A6;
ROSE Closest TMEM8C;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_107900144 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers