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Super-enhancer overview

SE ID: SE_02_104701817
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Peripheral blood
Biosample name: CD4+ cells_CTCL1181
Genomic region: chr3:52451211-52455481
Size: 4270
Super-enhancer rank 1817
Number of SE elements: 1
ChIP density(Case|Control): 6815.347|813.862
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNNC1 ;
ROSE Overlap TNNC1 ;
ROSE Proximal PHF7 ; NISCH ; SEMA3G ; BAP1 ; STAB1 ;
ROSE Closest TNNC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NT5DC2 ; SMIM4 ; NISCH ; SEMA3G ; TNNC1 ; STAB1 ; PHF7 ; BAP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_104701817 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers