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Super-enhancer overview

SE ID: SE_02_104701598
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Peripheral blood
Biosample name: CD4+ cells_CTCL1181
Genomic region: chr1:44631405-44665153
Size: 33748
Super-enhancer rank 1598
Number of SE elements: 19
ChIP density(Case|Control): 11464.1956|4893.46
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM53 ;
ROSE Overlap RNF220 ; TMEM53 ;
ROSE Proximal C1orf228 ;
ROSE Closest TMEM53 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM53 ; KIF2C ; RNU5D-1 ; C1orf228 ; RNU5F-1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_104701598 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers