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Super-enhancer overview

SE ID: SE_02_104701477
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Peripheral blood
Biosample name: CD4+ cells_CTCL1181
Genomic region: chr3:48464319-48467732
Size: 3413
Super-enhancer rank 1477
Number of SE elements: 1
ChIP density(Case|Control): 7708.2605|790.7921
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TREX1 ;
ROSE Overlap TREX1 ; ATRIP ;
ROSE Proximal SHISA5 ; PLXNB1 ; TMA7 ; CCDC51 ;
ROSE Closest TREX1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMA7 ; SHISA5 ; ATRIP ; CCDC51 ; FBXW12 ; PFKFB4 ; UCN2 ; MIR6823 ; PLXNB1 ; TREX1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_104701477 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers