SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_103601495
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC70_XY018
Genomic region: chr3:48470584-48508781
Size: 38197
Super-enhancer rank 1495
Number of SE elements: 15
ChIP density(Case|Control): 12333.8113|2135.2123
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SHISA5;
ROSE Overlap SHISA5;
ROSE Proximal SHISA5; PLXNB1; TMA7; ATRIP; CCDC51; PFKFB4; MIR6823; TREX1;
ROSE Closest SHISA5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_103601495 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers