SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_102800258
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: HL-60_WT
Genomic region: chr3:49333323-49352848
Size: 19525
Super-enhancer rank 258
Number of SE elements: 7
ChIP density(Case|Control): 18742.0475|2405.48
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: USP4 ;
ROSE Overlap USP4 ;
ROSE Proximal GPX1 ;
ROSE Closest USP4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA USP4 ; RHOA ; C3orf62 ; AMT ; MIR4271 ; TCTA ; NICN1 ; GPX1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102800258 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers