SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_102800228
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: HL-60_WT
Genomic region: chr19:55251876-55259061
Size: 7185
Super-enhancer rank 228
Number of SE elements: 2
ChIP density(Case|Control): 18179.487|920.3985
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP6R1 ;
ROSE Overlap PPP6R1 ;
ROSE Proximal TMEM86B ; MIR6804 ; HSPBP1 ; PTPRH ; BRSK1 ; MIR6802 ; MIR6803 ;
ROSE Closest PPP6R1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DNAAF3 ; MIR6804 ; PTPRH ; SYT5 ; PPP6R1 ; TNNI3 ; HSPBP1 ; TMEM150B ; TMEM86B ; MIR6803 ; SUV420H2 ; COX6B2 ; MIR6802 ; BRSK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102800228 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers