SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_102500517
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Esophagus
Biosample name: KYSE150
Genomic region: chr12:6960653-6965851
Size: 5198
Super-enhancer rank 517
Number of SE elements: 1
ChIP density(Case|Control): 25924.5052|1649.8452
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR200C ;
ROSE Overlap MIR200C ; PHB2 ; PTPN6 ; MIR141 ;
ROSE Proximal ENO2 ; SCARNA12 ; RNU7-1 ; C12orf57 ; ATN1 ; EMG1 ;
ROSE Closest MIR200C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PTPN6 ; C1S ; C12orf57 ; MIR141 ; LPCAT3 ; TPI1 ; ENO2 ; MIR200C ; ATN1 ; EMG1 ; RNU7-1 ; SPSB2 ; PHB2 ; SCARNA12 ; LRRC23 ; DSTNP2 ; RPL13P5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102500517 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers