SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_102500442
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Esophagus
Biosample name: KYSE150
Genomic region: chr22:39239486-39257685
Size: 18199
Super-enhancer rank 442
Number of SE elements: 3
ChIP density(Case|Control): 29640.7113|3233.9623
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDGFB ;
ROSE Overlap PDGFB ;
ROSE Proximal ;
ROSE Closest PDGFB ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RPL3 ; CBX7 ; PDGFB ; RNU86 ; SNORD43 ; SNORD83B ; SNORD83A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102500442 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers