SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_102500345
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Esophagus
Biosample name: KYSE150
Genomic region: chr19:776657-801116
Size: 24459
Super-enhancer rank 345
Number of SE elements: 6
ChIP density(Case|Control): 34042.0362|3984.3711
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTBP1 ;
ROSE Overlap PTBP1 ;
ROSE Proximal LPPR3 ; AZU1 ; PRTN3 ; MISP ; MIR3187 ; MIR4745 ; PTBP1 ;
ROSE Closest PTBP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ELANE ; PTBP1 ; MIR3187 ; PALM ; AZU1 ; MISP ; LPPR3 ; MIR4745 ; PRSS57 ; PRTN3 ; CFD ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102500345 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers