SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_102500230
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Esophagus
Biosample name: KYSE150
Genomic region: chr20:63680756-63701994
Size: 21238
Super-enhancer rank 230
Number of SE elements: 3
ChIP density(Case|Control): 41363.1288|5963.6304
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFRSF6B ;
ROSE Overlap RTEL1 ; RTEL1-TNFRSF6B ; TNFRSF6B ; ARFRP1 ;
ROSE Proximal ZGPAT ; LIME1 ; STMN3 ; ARFRP1 ; SLC2A4RG ;
ROSE Closest TNFRSF6B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TNFRSF6B ; STMN3 ; ARFRP1 ; GMEB2 ; ZGPAT ; RTEL1 ; SLC2A4RG ; RTEL1-TNFRSF6B ; LIME1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102500230 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers