SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_102500061
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Esophagus
Biosample name: KYSE150
Genomic region: chr12:12855814-12904459
Size: 48645
Super-enhancer rank 61
Number of SE elements: 14
ChIP density(Case|Control): 67791.672|8775.558
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPL13AP20 ;
ROSE Overlap RPL13AP20 ; GPRC5A ;
ROSE Proximal MIR614 ; DDX47 ; GPRC5D ;
ROSE Closest RPL13AP20 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RPL13AP20 ; GPRC5A ; DDX47 ; LOC100506314 ; APOLD1 ; MIR614 ; GPRC5D ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102500061 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers