SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_102500027
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Esophagus
Biosample name: KYSE150
Genomic region: chr20:62349690-62382022
Size: 32332
Super-enhancer rank 27
Number of SE elements: 6
ChIP density(Case|Control): 86743.5228|8597.0788
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LAMA5 ;
ROSE Overlap LAMA5 ; LAMA5-AS1 ;
ROSE Proximal LAMA5-AS1 ; CABLES2 ; RBBP8NL ; RPS21 ; MIR4758 ; ADRM1 ;
ROSE Closest LAMA5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LAMA5-AS1 ; MIR4758 ; LAMA5 ; RBBP8NL ; ADRM1 ; CABLES2 ; RPS21 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102500027 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers