SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_099100874
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast cancer cell line lung metastatic variant
Biosample name: MDA-MB-231 LM2
Genomic region: chr12:116521501-116528810
Size: 7309
Super-enhancer rank 874
Number of SE elements: 3
ChIP density(Case|Control): 10318.1153|1158.4765
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00173;
ROSE Overlap ;
ROSE Proximal MAP1LC3B2; LINC00173;
ROSE Closest LINC00173;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_099100874 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers