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Super-enhancer overview

SE ID: SE_02_099100043
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast cancer cell line lung metastatic variant
Biosample name: MDA-MB-231 LM2
Genomic region: chr19:38243448-38304009
Size: 60561
Super-enhancer rank 43
Number of SE elements: 17
ChIP density(Case|Control): 41678.0802|9277.9452
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPINT2;
ROSE Overlap PPP1R14A; YIF1B; SPINT2;
ROSE Proximal DPF1; C19orf33; KCNK6; CATSPERG; YIF1B; PPP1R14A;
ROSE Closest SPINT2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_099100043 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers