SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_099000007
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast cancer brain metastatic variant
Biosample name: MDA-MB-231 BrM2
Genomic region: chr20:35300770-35339017
Size: 38247
Super-enhancer rank 7
Number of SE elements: 11
ChIP density(Case|Control): 61562.3712|5140.3968
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM83C;
ROSE Overlap UQCC1;
ROSE Proximal EIF6; FAM83C-AS1; MMP24-AS1; FAM83C;
ROSE Closest FAM83C;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_099000007 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers