SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_098801052
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr16:564960-569946
Size: 4986
Super-enhancer rank 1052
Number of SE elements: 2
ChIP density(Case|Control): 10373.373|418.824
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NHLRC4 ;
ROSE Overlap NHLRC4 ; PRR35 ;
ROSE Proximal NHLRC4 ; MIR5587 ; RAB40C ; PIGQ ; CAPN15 ; MIR3176 ; LINC00235 ;
ROSE Closest NHLRC4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C16orf13 ; CAPN15 ; RAB40C ; LINC00235 ; MIR3176 ; PIGQ ; NHLRC4 ; MIR5587 ; WFIKKN1 ; RAB11FIP3 ; FAM195A ; PRR35 ; WDR90 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098801052 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers