SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_098800999
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr19:3553161-3580709
Size: 27548
Super-enhancer rank 999
Number of SE elements: 5
ChIP density(Case|Control): 12426.9028|2052.326
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMG20B ;
ROSE Overlap HMG20B ; MFSD12 ;
ROSE Proximal MFSD12 ; TBXA2R ; GIPC3 ; C19orf71 ; FZR1 ; CACTIN-AS1 ; CACTIN ;
ROSE Closest HMG20B ;
Lasso ;
PreSTIGE ;
ABC MFSD12 ; HMG20B ; GIPC3 ;
BETA FZR1 ; TBXA2R ; CACTIN ; DOHH ; GIPC3 ; HMG20B ; MFSD12 ; C19orf71 ; SMIM24 ; CACTIN-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800999 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers