SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_098800969
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr11:57424330-57434340
Size: 10010
Super-enhancer rank 969
Number of SE elements: 4
ChIP density(Case|Control): 12005.994|1477.476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC43A3 ;
ROSE Overlap SLC43A3 ;
ROSE Proximal PRG2 ; RTN4RL2 ; PRG3 ;
ROSE Closest SLC43A3 ;
Lasso SLC43A1 ; PRG2 ; SSRP1 ; UBE2L6 ; PRG3 ; TIMM10 ; SLC43A3 ; TNKS1BP1 ; RTN4RL2 ;
PreSTIGE ;
ABC CLP1 ; YPEL4 ; ZDHHC5 ;
BETA PRG2 ; PRG3 ; SLC43A3 ; SLC43A1 ; P2RX3 ; SSRP1 ; RTN4RL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800969 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers