SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800725
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr12:54356235-54389832
Size: 33597
Super-enhancer rank 725
Number of SE elements: 10
ChIP density(Case|Control): 15632.6841|3090.924
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR84 ;
ROSE Overlap LOC102724050 ; ZNF385A ; GPR84 ;
ROSE Proximal COPZ1 ; ITGA5 ; LOC102724050 ; MIR148B ;
ROSE Closest GPR84 ;
Lasso ;
PreSTIGE ;
ABC HOXC9 ; HOXC-AS1 ; HOXC-AS2 ; HOXC-AS3 ; HOXC10 ;
BETA ITGA5 ; COPZ1 ; ZNF385A ; NFE2 ; LOC102724050 ; HNRNPA1 ; CBX5 ; MIR148B ; GPR84 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800725 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers